When referencing jCODE, please consider citing the following papers where relevant:

Underlying discretization:

• Vishnampet Ganapathi Subramanian, R. (2015). An exact and consistent adjoint method for high-fidelity discretization of the compressible flow equations. Doctoral dissertation, University of Illinois at Urbana-Champaign.

Combustion modules:

• Capecelatro, J., Bodony, D. J., & Freund, J. B. (2019). Adjoint-based sensitivity and ignition threshold mapping in a turbulent mixing layer. Combustion Theory and Modelling, 23(1), 147-179.

Eulerian-Lagrangian modules:

• Shallcross, G. S., Fox, R. O., & Capecelatro, J. (2020). A volume-filtered description of compressible particle-laden flows. International Journal of Multiphase Flow, 122, 103138.

Adjoint modules:

• Vishnampet, R., Bodony, D. J., & Freund, J. B. (2015). A practical discrete-adjoint method for high-fidelity compressible turbulence simulations. Journal of Computational Physics, 285, 173-192.
• Kord, A., & Capecelatro, J. (2019). Optimal perturbations for controlling the growth of a Rayleigh–Taylor instability. Journal of Fluid Mechanics, 876, 150-185.